5W2P

Crystal structure of Mycobacterium tuberculosis KasA in complex with 6U5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.157 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3-oxoacyl-[acyl-carrier-protein] synthase 1
A
439Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman)Mutation(s): 1 
Gene Names: kasA
EC: 2.3.1.41
Find proteins for H8ESN0 (Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman))
Go to UniProtKB:  H8ESN0
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
6U5
Query on 6U5

Download SDF File 
Download CCD File 
A
~{N}-(1-methylindazol-6-yl)butane-1-sulfonamide
C12 H17 N3 O2 S
DDWBORAVXJGWPK-UHFFFAOYSA-N
 Ligand Interaction
IPA
Query on IPA

Download SDF File 
Download CCD File 
A
ISOPROPYL ALCOHOL
2-PROPANOL
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
 Ligand Interaction
TCE
Query on TCE

Download SDF File 
Download CCD File 
A
3,3',3''-phosphanetriyltripropanoic acid
3-[bis(2-carboxyethyl)phosphanyl]propanoic acid
C9 H15 O6 P
PZBFGYYEXUXCOF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.186 
  • R-Value Work: 0.157 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 77.298α = 90.00
b = 77.298β = 90.00
c = 145.208γ = 120.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesAI109713

Revision History 

  • Version 1.0: 2018-12-05
    Type: Initial release