5W1L

Echinococcus granulosus thioredoxin glutathione reductas (egTGR) with Gold


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.88 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.185 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The Enzymatic and Structural Basis for Inhibition of Echinococcus granulosus Thioredoxin Glutathione Reductase by Gold(I).

Salinas, G.Gao, W.Wang, Y.Bonilla, M.Yu, L.Novikov, A.Virginio, V.G.Ferreira, H.B.Vieites, M.Gladyshev, V.N.Gambino, D.Dai, S.

(2017) Antioxid. Redox Signal. 27: 1491-1504


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Thioredoxin glutathione reductase
A
586Echinococcus granulosusMutation(s): 0 
Gene Names: TGR
Find proteins for Q869D7 (Echinococcus granulosus)
Go to UniProtKB:  Q869D7
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Thioredoxin glutathione reductase
B
584Echinococcus granulosusMutation(s): 0 
Gene Names: TGR
Find proteins for Q869D7 (Echinococcus granulosus)
Go to UniProtKB:  Q869D7
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download SDF File 
Download CCD File 
A, B
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
AU
Query on AU

Download SDF File 
Download CCD File 
A, B
GOLD ION
Au
ZBKIUFWVEIBQRT-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.88 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.185 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 109.346α = 90.00
b = 109.346β = 90.00
c = 258.713γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
HKL-2000data scaling
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-11-22
    Type: Initial release