5VZ1

Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.112 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.218 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains)

Radwanska, M.J.Derewenda, U.Kossiakoff, A.Derewenda, Z.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Apo Antibody Fab Light Chain
A, C
215N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Apo Antibody Fab Heavy Chain
B, D
235N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, C
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.112 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.218 
  • Space Group: P 41 2 2
Unit Cell:
Length (Å)Angle (°)
a = 74.621α = 90.00
b = 74.621β = 90.00
c = 323.695γ = 90.00
Software Package:
Software NamePurpose
PHENIXmodel building
HKL-3000data scaling
HKL-3000data reduction
HKL-3000data processing
PHENIXphasing
PHENIXrefinement
HKL-3000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-06-27
    Type: Initial release