5VT1

Crystal Structure of the Human CAMKK2B bound to a thiadiazinone benzamide inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.185 
  • R-Value Work: 0.161 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

1,2,6-Thiadiazinones as Novel Narrow Spectrum Calcium/Calmodulin-Dependent Protein Kinase Kinase 2 (CaMKK2) Inhibitors.

Asquith, C.R.M.Godoi, P.H.Counago, R.M.Laitinen, T.Scott, J.W.Langendorf, C.G.Oakhill, J.S.Drewry, D.H.Zuercher, W.J.Koutentis, P.A.Willson, T.M.Kalogirou, A.S.

(2018) Molecules 23: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Calcium/calmodulin-dependent protein kinase kinase 2
A
291Homo sapiensMutation(s): 0 
Gene Names: CAMKK2 (CAMKKB, KIAA0787)
EC: 2.7.11.17
Find proteins for Q96RR4 (Homo sapiens)
Go to Gene View: CAMKK2
Go to UniProtKB:  Q96RR4
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
9JS
Query on 9JS

Download SDF File 
Download CCD File 
A
4-({5-[(3-hydroxy-4-methylphenyl)amino]-4-oxo-4H-1,2,6-thiadiazin-3-yl}amino)benzamide
C17 H15 N5 O3 S
DHBUOVPLOHMOJE-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.185 
  • R-Value Work: 0.161 
  • Space Group: P 61
Unit Cell:
Length (Å)Angle (°)
a = 100.454α = 90.00
b = 100.454β = 90.00
c = 69.674γ = 120.00
Software Package:
Software NamePurpose
BUSTERrefinement
XDSdata reduction
PHASERphasing
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Sao Paulo Research FoundationBrazil13/50724-5

Revision History 

  • Version 1.0: 2017-05-24
    Type: Initial release
  • Version 1.1: 2017-11-29
    Type: Structure summary
  • Version 1.2: 2018-05-30
    Type: Data collection, Database references
  • Version 1.3: 2018-06-06
    Type: Data collection, Database references
  • Version 1.4: 2019-04-17
    Type: Author supporting evidence, Data collection