5VOK

Crystal structure of the C7orf59-HBXIP dimer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.312 
  • R-Value Work: 0.280 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of C7orf59-HBXIP and insights into Ragulator assembly

Rasheed, N.Lima, T.B.Nascimento, A.F.Z.Silva, A.L.S.Nakahira, M.Righetto, G.L.Bar-Peled, L.Shen, K.Sabatini, D.M.Gozzo, F.C.Aparicio, R.Smetana, J.H.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ragulator complex protein LAMTOR5
A, C, E, G
91Homo sapiensMutation(s): 0 
Gene Names: LAMTOR5 (HBXIP, XIP)
Find proteins for O43504 (Homo sapiens)
Go to Gene View: LAMTOR5
Go to UniProtKB:  O43504
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ragulator complex protein LAMTOR4
B, D, F, H
103Homo sapiensMutation(s): 0 
Gene Names: LAMTOR4 (C7orf59)
Find proteins for Q0VGL1 (Homo sapiens)
Go to Gene View: LAMTOR4
Go to UniProtKB:  Q0VGL1
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.89 Å
  • R-Value Free: 0.312 
  • R-Value Work: 0.280 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 180.884α = 90.00
b = 64.763β = 115.18
c = 79.231γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
DIALSdata reduction
PHENIXrefinement
MrBUMPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq-Brazil)Brazil190174/2012-9
Fundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP-Brazil)Brazil2014/12445-0

Revision History 

  • Version 1.0: 2018-05-23
    Type: Initial release