5V0U

Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to follow on fragment EBSI-4723 4-(5-chlorothiophen-2-yl)-1H-pyrazole


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.170 
  • R-Value Observed: 0.173 

wwPDB Validation 3D Report Full Report



Literature

Fragment screening by STD NMR identifies novel site binders against influenza A virus polymerase

Pierce, P.G.Muruthii, M.M.Moen, S.O.Abendroth, J.Davies, D.R.Labaied, M.Marathias, V.M.Begley, D.W.Hokanson, D.Suto, R.K.Hubbard, B.K.Myler, P.J.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Polymerase acidic protein
A
464Influenza A virus (A/Wilson-Smith/1933(H1N1))Mutation(s): 0 
Gene Names: PA
EC: 3.1
Find proteins for P15659 (Influenza A virus (strain A/Wilson-Smith/1933 H1N1))
Go to UniProtKB:  P15659
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
8QG
Query on 8QG

Download CCD File 
A
4-(5-chlorothiophen-2-yl)-1H-pyrazole
C7 H5 Cl N2 S
FSGXXIOYDLGFFB-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.170 
  • R-Value Observed: 0.173 
  • Space Group: P 65 2 2
  • Diffraction Data DOI: 5V0U Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 68.85α = 90
b = 68.85β = 90
c = 396.33γ = 120
Software Package:
Software NamePurpose
XSCALEdata scaling
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction
XDSdata reduction
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-03-08
    Type: Initial release