5UYS

Human steroidogenic cytochrome P450 17A1 with 3alphaOH-5alpha-abiraterone analog


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.392 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Binding of Abiraterone Analogs Inhibiting Steroidogenic Cytochrome P450 17A1

Petrunak, E.M.Scott, E.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Steroid 17-alpha-hydroxylase/17,20 lyase
A, B, C, D
494Homo sapiensMutation(s): 0 
Gene Names: CYP17A1 (CYP17, S17AH)
EC: 1.14.14.19
Find proteins for P05093 (Homo sapiens)
Go to Gene View: CYP17A1
Go to UniProtKB:  P05093
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
8QD
Query on 8QD

Download SDF File 
Download CCD File 
A, B, C, D
(3alpha,5alpha,8alpha)-17-(pyridin-3-yl)androst-16-en-3-ol
C24 H33 N O
UNJQRCXVHBZVTM-PFQGPGDOSA-N
 Ligand Interaction
HEM
Query on HEM

Download SDF File 
Download CCD File 
A, B, C, D
PROTOPORPHYRIN IX CONTAINING FE
HEME
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.392 Å
  • R-Value Free: 0.245 
  • R-Value Work: 0.190 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 89.759α = 90.00
b = 153.180β = 90.00
c = 168.885γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
PHENIXrefinement
XDSdata reduction
PHASERphasing
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesR01GM102505

Revision History 

  • Version 1.0: 2018-02-28
    Type: Initial release