5UXQ

Structure of anti-HIV trimer apex antibody PGT143

  • Classification: IMMUNE SYSTEM
  • Expression System: Homo sapiens

  • Deposited: 2017-02-23 Released: 2017-04-19 
  • Deposition Author(s): Kong, L., Wilson, I.A.
  • Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.415 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.229 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic Beta-Hairpin Structure

Lee, J.-H.Andrabi, R.Su, C.-Y.Yasmeen, A.Julien, J.-P.Kong, L.Wu, N.C.McBride, R.Sok, D.Pauthner, M.Cotrell, C.A.Nieusma, T.Blattner, C.Paulson, J.C.Klasee, P.J.Wilson, I.A.Burton, D.R.Ward, A.B.

(2017) Immunity 46: 1-13


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PGT143 Fab Heavy Chain
A, H
240N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
PGT143 Fab Light Chain
B, L
217N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.415 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.229 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 70.866α = 90.00
b = 97.643β = 90.00
c = 126.206γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-02-23 
  • Released Date: 2017-04-19 
  • Deposition Author(s): Kong, L., Wilson, I.A.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesUM1 AI100663

Revision History 

  • Version 1.0: 2017-04-19
    Type: Initial release
  • Version 1.1: 2017-09-20
    Type: Author supporting evidence