5UR3

Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor

Acker, T.M.Craik, C.S.Bohn, M.-F.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
KSHV protease
A, B
193Human herpesvirus 8Mutation(s): 0 
Gene Names: ORF17
Find proteins for O40922 (Human herpesvirus 8)
Go to UniProtKB:  O40922
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
8OY
Query on 8OY

Download SDF File 
Download CCD File 
A, B
4-{[6-(cyclohexylmethyl)pyridine-2-carbonyl]amino}-3-(phenylamino)benzoic acid
C26 H27 N3 O3
PIPBPJWDZSBLMQ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.180 
  • Space Group: I 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 67.400α = 90.00
b = 92.860β = 90.00
c = 118.930γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
SCALAdata scaling
PHENIXphasing
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesNIH R01 GM104659
National Institutes of Health/National Institute of General Medical SciencesUnited States1F32GM111012

Revision History 

  • Version 1.0: 2017-03-08
    Type: Initial release
  • Version 1.1: 2017-09-27
    Type: Author supporting evidence