5UQG

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor p200


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.168 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor p200

Kim, Y.Maltseva, N.Makowska-Grzyska, M.Gu, M.Gollapalli, D.Hedstrom, L.Anderson, W.F.Joachimiak, A.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Inosine-5'-monophosphate dehydrogenase
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H
406Campylobacter jejuni subsp. jejuniCampylobacter jejuni subsp. jejuni CG8486
This entity is chimeric
Mutation(s): 0 
Gene Names: guaBCJ14980A_1064Cj8486_1016
EC: 1.1.1.205
UniProt
Find proteins for A0A826DZ23 (Campylobacter jejuni subsp. jejuni CG8486)
Explore A0A826DZ23 
Go to UniProtKB:  A0A826DZ23
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A826DZ23
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IMP
Query on IMP

Download Ideal Coordinates CCD File 
EA [auth G],
GA [auth H],
I [auth A],
N [auth B],
P [auth C],
EA [auth G],
GA [auth H],
I [auth A],
N [auth B],
P [auth C],
S [auth D],
V [auth E],
Z [auth F]
INOSINIC ACID
C10 H13 N4 O8 P
GRSZFWQUAKGDAV-KQYNXXCUSA-N
 Ligand Interaction
8L4
Query on 8L4

Download Ideal Coordinates CCD File 
AA [auth F],
BA [auth F],
HA [auth H],
J [auth A],
O [auth B],
AA [auth F],
BA [auth F],
HA [auth H],
J [auth A],
O [auth B],
Q [auth C],
T [auth D],
W [auth E]
3-(2-{[(4-chlorophenyl)carbamoyl]amino}propan-2-yl)-N-hydroxybenzene-1-carboximidamide
C17 H19 Cl N4 O2
NZOIAPIDYRJDOM-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download Ideal Coordinates CCD File 
K [auth A],
X [auth E]
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
K
Query on K

Download Ideal Coordinates CCD File 
CA [auth F],
DA [auth G],
FA [auth H],
L [auth A],
M [auth B],
CA [auth F],
DA [auth G],
FA [auth H],
L [auth A],
M [auth B],
R [auth C],
U [auth D],
Y [auth E]
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.168 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 95.887α = 90
b = 137.963β = 95.99
c = 116.548γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
HKL-3000phasing
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2017-03-01
    Type: Initial release
  • Version 1.1: 2017-09-20
    Changes: Author supporting evidence
  • Version 1.2: 2020-01-01
    Changes: Author supporting evidence