5UQA

Insulin with proline analog FzP at position B28 in the R6 state

• PDB DOI:  https://doi.org/10.2210/pdb5UQA/pdb

• Classification: HORMONE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2017-02-07 Released: 2018-02-21 
• Deposition Author(s): Lieblich, S.A., Fang, K.Y., Tirrell, D.A.
• Funding Organization(s): Novo Nordisk Foundation

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.31 Å
• R-Value Free: 0.182 
• R-Value Work: 0.152 
• R-Value Observed: 0.154 

Literature

Insulin with proline analog FzP at position B28 in the R6 state

Lieblich, S.A., Fang, K.Y., Tirrell, D.A.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D3  (3D View)
Global Stoichiometry: Hetero 12-mer - A6B6 

Biological assembly 1 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 36.07 kDa 
• Atom Count: 2,688 
• Modelled Residue Count: 297 
• Deposited Residue Count: 306 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Insulin, chain A	A, C, E, G, I, K	21	Homo sapiens	Mutation(s): 0  Gene Names: INS
UniProt & NIH Common Fund Data Resources
Find proteins for P01308 (Homo sapiens) Explore P01308  Go to UniProtKB:  P01308
PHAROS:  P01308

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Insulin, chain B	B, D, F, H, J, L	30	Homo sapiens	Mutation(s): 0  Gene Names: INS
UniProt & NIH Common Fund Data Resources
Find proteins for P01308 (Homo sapiens) Explore P01308  Go to UniProtKB:  P01308
PHAROS:  P01308

Small Molecules

Ligands 6 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
IPH	BA [auth K], M [auth A], P [auth C], R [auth E], V [auth G], X [auth I]	PHENOL C6 H6 O ISWSIDIOOBJBQZ-UHFFFAOYSA-N
GOL	AA [auth J]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
ZN	N [auth B], Q [auth D]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
ACN	DA [auth L]	ACETONE C3 H6 O CSCPPACGZOOCGX-UHFFFAOYSA-N
CL	O [auth B], W [auth H]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M
NA	CA [auth K], S [auth E], T [auth F], U [auth F], Y [auth I], Z [auth J]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
4FB	B, D, F, H, J, L	L-PEPTIDE LINKING	C5 H8 F N O2		PRO

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.31 Å
• R-Value Free: 0.182 
• R-Value Work: 0.152 
• R-Value Observed: 0.154 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 46.936	α = 90
b = 61.258	β = 111.694
c = 60.39	γ = 90

Software Package:

Software Name	Purpose
phenix.refine	refinement
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2018-02-21 
Deposition Author(s): Lieblich, S.A., Fang, K.Y., Tirrell, D.A.

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Funding Organization	Location	Grant Number
Novo Nordisk Foundation	Denmark	--

Revision History  

• Version 1.0: 2018-02-21
  Type: Initial release
  
• Version 1.1: 2020-01-15
  Changes: Author supporting evidence