5UNA

Fragment of 7SK snRNA methylphosphate capping enzyme


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Fragment of 7SK snRNA methylphosphate capping enzyme

Wu, H.Tempel, W.Dombrovski, L.McCarthy, A.A.Loppnau, P.Bountra, C.Arrowsmith, C.H.Edwards, A.M.Park, H.Structural Genomics Consortium (SGC)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
7SK snRNA methylphosphate capping enzyme
A, B, C, D, E, F
292Homo sapiensMutation(s): 0 
Gene Names: MEPCE (BCDIN3)
EC: 2.1.1.-
Find proteins for Q7L2J0 (Homo sapiens)
Go to Gene View: MEPCE
Go to UniProtKB:  Q7L2J0
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
unidentified peptide section/fragment
M, N, O, Q, R
6N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SAH
Query on SAH

Download SDF File 
Download CCD File 
A, B, C, D, E, F
S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
UNK
Query on UNK
M, N, O, Q, R
L-PEPTIDE LINKINGC4 H9 N O2

--

MSE
Query on MSE
A, B, C, D, E, F
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 183.240α = 90.00
b = 183.240β = 90.00
c = 151.390γ = 120.00
Software Package:
Software NamePurpose
BUSTERrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
SOLVEphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-03-08
    Type: Initial release