Download MendeleyCrystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans
Abendroth, J., Mayclin, S.J., Lorimer, D., Edwards, T.E.To be published.
5UJU
Crystal structure of NAD-dependent aldehyde dehydrogenase from Burkholderia multivorans
- PDB DOI: https://doi.org/10.2210/pdb5UJU/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Burkholderia multivorans ATCC 17616
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2017-01-19 Released: 2017-04-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.197
- R-Value Work: 0.148
- R-Value Observed: 0.150
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| NAD-dependent aldehyde dehydrogenase | 576 | Burkholderia multivorans ATCC 17616 | Mutation(s): 0 Gene Names: BMULJ_00382 EC: 1.2.1.3 |  | |
UniProt | |||||
Find proteins for A0A0H3KBY8 (Burkholderia multivorans (strain ATCC 17616 / 249)) Explore A0A0H3KBY8 Go to UniProtKB: A0A0H3KBY8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3KBY8 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| IMD Query on IMD | F [auth A], K [auth B] | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O |  | ||
| EDO Query on EDO | D [auth A], E [auth A], G [auth B], I [auth B], J [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| NA Query on NA | C [auth A], H [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.197
- R-Value Work: 0.148
- R-Value Observed: 0.150
- Space Group: P 62
- Diffraction Data: https://doi.org/10.18430/M35UJU
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 114.43 | α = 90 |
| b = 114.43 | β = 90 |
| c = 154.52 | γ = 120 |
| Software Name | Purpose |
|---|---|
| XSCALE | data scaling |
| XDS | data reduction |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| PHASER | phasing |
| Coot | model building |
| BALBES | phasing |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2017-04-12 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Revision History (Full details and data files)
- Version 1.0: 2017-04-12
Type: Initial release - Version 1.1: 2023-10-04
Changes: Data collection, Database references, Derived calculations, Refinement description
