5UC2

Crystal Structure of Beta-barrel-like, Putative ATP binding Protein of Domain of Unknown Function DUF1849 from Brucella abortus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.101 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of Beta-barrel-like Protein of Domain of Unknown Function DUF1849

Kim, Y.Bigelow, L.Endres, M.Babnigg, G.Crosson, S.Joachimiak, A.Midwest Center for Structural Genomics (MCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Domain of Unknown Function DUF1849
A, B, C, D
255Brucella abortus (strain 2308)Mutation(s): 0 
Find proteins for Q2YRJ0 (Brucella abortus (strain 2308))
Go to UniProtKB:  Q2YRJ0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B, C, D
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.101 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.195 
  • Space Group: P 1
  • Diffraction Data DOI: 
    10.15785/SBGRID/445 SBGrid
Unit Cell:
Length (Å)Angle (°)
a = 47.360α = 90.09
b = 69.240β = 90.02
c = 83.239γ = 78.66
Software Package:
Software NamePurpose
HKL-3000data reduction
PHENIXrefinement
HKL-3000data scaling
HKL-3000phasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited States--

Revision History 

  • Version 1.0: 2017-02-08
    Type: Initial release
  • Version 1.1: 2017-09-20
    Type: Author supporting evidence
  • Version 1.2: 2018-01-24
    Type: Database references, Structure summary