5UBW

Structure of catalytic domain of Ssel


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.394 Å
  • R-Value Free: 0.304 
  • R-Value Work: 0.250 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of catalytic domain of Ssel

Shrestha, R.Das, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Deubiquitinase SseL
A, B
187Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Mutation(s): 0 
Gene Names: sseL
EC: 3.4.22.-
Find proteins for Q8ZNG2 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Go to UniProtKB:  Q8ZNG2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.394 Å
  • R-Value Free: 0.304 
  • R-Value Work: 0.250 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 109.819α = 90.00
b = 64.983β = 113.61
c = 56.884γ = 90.00
Software Package:
Software NamePurpose
REFMACphasing
HKL-2000data reduction
PHENIXrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2016-12-21 
  • Released Date: 2017-12-27 
  • Deposition Author(s): Shrestha, R., Das, C.

Funding OrganizationLocationGrant Number
National Institutes of HealthUnited States--

Revision History 

  • Version 1.0: 2017-12-27
    Type: Initial release