Circular Permutation Reveals a Chromophore Precursor Binding Pocket of the Siderophore Tailoring Enzyme PvdQ
Mascarenhas, R., Clevenger, K., Catlin, D., Wu, R., Fast, W., Liu, D.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Acyl-homoserine lactone acylase PvdQ | 709 | Pseudomonas aeruginosa | Mutation(s): 2  Gene Names: pvdQ EC: 3.5.1.97 | ||
UniProt | |||||
Find proteins for Q9I194 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I194  Go to UniProtKB:  Q9I194 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9I194 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
83M Query on 83M | B [auth A] | N-[(1R)-1-{(6S)-6-[(2-amino-2-oxoethyl)carbamoyl]-1,4,5,6-tetrahydropyrimidin-2-yl}-2-(4-hydroxyphenyl)ethyl]-N~2~-tetradecanoyl-L-glutamine C34 H54 N6 O7 DGAYEIHJKULBKL-HZFUHODCSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 120.384 | α = 90 |
b = 168.361 | β = 90 |
c = 93.643 | γ = 90 |
Software Name | Purpose |
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SCALA | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
iMOSFLM | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | CHE-1308672 |
Robert A. Welch Foundation | United States | F-1572 |