Crystal structure of a Short chain dehydrogenase from Burkholderia cenocepacia J2315 in complex with NADP
Abendroth, J., Horanyi, P.S., Lorimer, D.D., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Short chain dehydrogenase | 254 | Burkholderia cenocepacia J2315 | Mutation(s): 0  Gene Names: BCAL2464 | ![]() | |
UniProt | |||||
Find proteins for B4E730 (Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)) Explore B4E730  Go to UniProtKB:  B4E730 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | B4E730 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAP Query on NAP | E [auth A], I [auth B], M [auth C], Q [auth D] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N | |||
IMD Query on IMD | H [auth A], L [auth B], P [auth C], T [auth D] | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O | |||
EDO Query on EDO | F [auth A] G [auth A] J [auth B] K [auth B] N [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 136.97 | α = 90 |
b = 72.37 | β = 100.88 |
c = 100.53 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
MOLREP | phasing |
PHENIX | model building |
Coot | model building |
PHENIX | refinement |
PDB_EXTRACT | data extraction |