5TPN | pdb_00005tpn

Crystal structure of RSV F in complex with human antibody hRSV90

• PDB DOI: https://doi.org/10.2210/pdb5TPN/pdb

• Classification: IMMUNE SYSTEM
• Organism(s): Human respiratory syncytial virus A2, Enterobacteria phage Ox2, Homo sapiens
• Expression System: Homo sapiens
• Mutation(s): Yes 


• Deposited: 2016-10-20 Released: 2017-02-01 
• Deposition Author(s): Mousa, J.J., Crowe, J.E.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.14 Å
• R-Value Free: 
  0.262 (Depositor), 0.260 (DCC) 
• R-Value Work: 
  0.224 (Depositor), 0.220 (DCC) 
• R-Value Observed: 
  0.226 (Depositor) 

Starting Models: experimental

Literature

Crystal structure of RSV F in complex with human antibody hRSV90

Mousa, J.J., Crowe, J.E.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 3-mer - A1B1C1 Pseudo Symmetry: Asymmetric - C1 
Pseudo Stoichiometry: Hetero 3-mer - A2B1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 103.68 kDa 
• Atom Count: 7,073 
• Modeled Residue Count: 921 
• Deposited Residue Count: 949 
• Unique protein chains: 3

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fusion glycoprotein F0,Fibritin	A	510	Human respiratory syncytial virus A2, Enterobacteria phage Ox2 This entity is chimeric	Mutation(s): 4
UniProt
Find proteins for P03420 (Human respiratory syncytial virus A (strain A2)) Explore P03420  Go to UniProtKB:  P03420
Find proteins for Q38650 (Enterobacteria phage Ox2) Explore Q38650  Go to UniProtKB:  Q38650
UniProt Groups	P03420Q38650

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
hRSV90 heavy chain	B [auth H]	225	Homo sapiens	Mutation(s): 0

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
hRSV0 light chain	C [auth L]	214	Homo sapiens	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.14 Å
• R-Value Free:  0.262 (Depositor), 0.260 (DCC) 
• R-Value Work:  0.224 (Depositor), 0.220 (DCC) 
• R-Value Observed: 0.226 (Depositor) 

Space Group: H 3 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 148.25	α = 90
b = 148.25	β = 90
c = 538.52	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2017-02-01 
Deposition Author(s): Mousa, J.J., Crowe, J.E.

Revision History  

• Version 1.0: 2017-02-01
  Type: Initial release
  
• Version 1.1: 2023-10-04
  Changes: Data collection, Database references, Refinement description
• Version 1.2: 2024-10-16
  Changes: Structure summary