5TKO

RNA heptamer duplex with one 2'-5'-linkage


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.52 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.144 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

RNA heptamer duplex with one 2'-5'-linkage

Luo, Z.Sheng, J.Wang, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3')A,C7unidentified
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3')B,D7unidentified
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CO
Query on CO

Download SDF File 
Download CCD File 
A
COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.52 Å
  • R-Value Free: 0.177 
  • R-Value Work: 0.144 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 26.541α = 90.00
b = 52.941β = 95.95
c = 27.732γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
REFMACrefinement
PHASERphasing
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2016-10-07 
  • Released Date: 2017-10-11 
  • Deposition Author(s): Luo, Z., Sheng, J.

Revision History 

  • Version 1.0: 2017-10-11
    Type: Initial release