5TFA

Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dUTP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.158 
  • R-Value Observed: 0.161 

wwPDB Validation   3D Report Full Report



Literature

Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain

Wang, C.Aleksandrov, A.A.Yang, Z.Forouhar, F.Proctor, E.Kota, P.An, J.Kaplan, A.Khazanov, N.Boel, G.Stockwell, B.R.Senderowitz, H.Dokholyan, N.V.Riordan, J.R.Brouillette, C.G.Hunt, J.F.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Cystic fibrosis transmembrane conductance regulatorA229Homo sapiensMutation(s): 1 
Gene Names: CFTRABCC7
EC: 3.6.3.49 (PDB Primary Data), 5.6.1.6 (UniProt)
Find proteins for P13569 (Homo sapiens)
Explore P13569 
Go to UniProtKB:  P13569
NIH Common Fund Data Resources
PHAROS  P13569
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DUT
Query on DUT

Download CCD File 
A
DEOXYURIDINE-5'-TRIPHOSPHATE
C9 H15 N2 O14 P3
AHCYMLUZIRLXAA-SHYZEUOFSA-N
 Ligand Interaction
MG
Query on MG

Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.195 
  • R-Value Work: 0.158 
  • R-Value Observed: 0.161 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 40.115α = 90
b = 40.115β = 90
c = 141.592γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data processing
HKL-2000data scaling

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Cystic Fibrosis foundationUnited StatesHunt13XX0

Revision History 

  • Version 1.0: 2018-05-09
    Type: Initial release