PanDDA analysis group deposition - Bromodomain of human ATAD2 fragment screening
Snee, M., Talon, R., Fowley, D., Collins, P., Nelson, A., Arrowsmith, C.H., Bountra, C., Edwards, A., Von-Delft, F.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATPase family AAA domain-containing protein 2 | 130 | Homo sapiens | Mutation(s): 0  Gene Names: ATAD2, L16, PRO2000 EC: 3.6.1.3 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6PL18 (Homo sapiens) Explore Q6PL18  Go to UniProtKB:  Q6PL18 | |||||
PHAROS:  Q6PL18 GTEx:  ENSG00000156802  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q6PL18 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
RHG (Subject of Investigation/LOI) Query on RHG | B [auth A], C [auth A], D [auth A] | (3aR,8S,9aS)-2-[(trifluoromethyl)sulfonyl]decahydro-3a,8-epoxypyrrolo[3,4-c]azocine C10 H15 F3 N2 O3 S SDCYRSFOCAJCPQ-DJLDLDEBSA-N | |||
SO4 Query on SO4 | E [auth A], F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | G [auth A], H [auth A], I [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 80.34 | α = 90 |
b = 80.34 | β = 90 |
c = 139.99 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |