Download MendeleyPanDDA analysis group deposition
Newman, J.A., Katis, V.L., Gavard, A.E., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.To be published.
5QSN
PanDDA analysis group deposition -- Crystal Structure of human STAG1 in complex with Z1272480091
- DOI: 10.2210/pdb5QSN/pdb
- Deposition Group: G_1002083 (changed state)
- Classification: TRANSCRIPTION
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2019-05-25 Released: 2019-08-21
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.66 Å
- R-Value Free: 0.288
- R-Value Work: 0.217
- R-Value Observed: 0.221
wwPDB Validation 3D Report Full Report
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cohesin subunit SA-1 | A, B | 459 | Homo sapiens | Mutation(s): 0 Gene Names: STAG1, SA1, SCC3 |  |
Find proteins for Q8WVM7 (Homo sapiens) Explore Q8WVM7 Go to UniProtKB: Q8WVM7 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: Q8WVM7 GTEx: ENSG00000118007 | |||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| O2J Query on O2J | B | (2R)-2-(methoxymethyl)-4-(pyridin-2-yl)morpholine C11 H16 N2 O2 QTYSPYFVCIFIBZ-SNVBAGLBSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.66 Å
- R-Value Free: 0.288
- R-Value Work: 0.217
- R-Value Observed: 0.221
- Space Group: P 21 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 154.984 | α = 90 |
| b = 167.688 | β = 90 |
| c = 47.106 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| REFMAC | phasing |
Entry History
Deposition Data
- Deposited Date: 2019-05-25
- Released Date: 2019-08-21 Deposition Author(s): Newman, J.A., Katis, V.L., Gavard, A.E., von Delft, F., Arrowsmith, C.H., Edwards, A., Bountra, C., Gileadi, O.
