Biological Assembly 1  

 3D View: Structure | Ligand Interaction

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 54-mer - A1BCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 1797.38 kDa 
• Atom Count: 98998 
• Residue Count: 9723 
• Unique protein chains: 54
• Unique nucleic acid chains: 2

5OOL

Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA

• DOI: 10.2210/pdb5OOL/pdb
• EMDataResource: EMD-3842

• Classification: RIBOSOME
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2017-08-08 Released: 2017-09-13 
• Deposition Author(s): Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V.

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.06 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Structures of the human mitochondrial ribosome in native states of assembly.

Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V.

(2017) Nat Struct Mol Biol 24: 866-869

• PubMed: 28892042 
• DOI: 10.1038/nsmb.3464
• Structures With Same Primary Citation


• PubMed Abstract: 
  

Mammalian mitochondrial ribosomes (mitoribosomes) have less rRNA content and 36 additional proteins compared with the evolutionarily related bacterial ribosome. These differences make the assembly of mitoribosomes more complex than the assembly of bacterial ribosomes, but the molecular details of mitoribosomal biogenesis remain elusive. Here, we report the structures of two late-stage assembly intermediates of the human mitoribosomal large subunit (mt-LSU) isolated from a native pool within a human cell line and solved by cryo-EM to ∼3-Å resolution. Comparison of the structures reveals insights into the timing of rRNA folding and protein incorporation during the final steps of ribosomal maturation and the evolutionary adaptations that are required to preserve biogenesis after the structural diversification of mitoribosomes. Furthermore, the structures redefine the ribosome silencing factor (RsfS) family as multifunctional biogenesis factors and identify two new assembly factors (L0R8F8 and mt-ACP) not previously implicated in mitoribosomal biogenesis.

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Organizational Affiliation: 

MRC Laboratory of Molecular Biology, Cambridge, UK.

Macromolecules

Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L14, mitochondrial	L	145	Homo sapiens	Mutation(s): 0  Gene Names: MRPL14, MRPL32, RPML32
Find proteins for Q6P1L8 (Homo sapiens) Explore Q6P1L8  Go to UniProtKB:  Q6P1L8
NIH Common Fund Data Resources
PHAROS  Q6P1L8 GTEx  ENSG00000180992

Entity ID: 11
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L15, mitochondrial	M	296	Homo sapiens	Mutation(s): 0  Gene Names: MRPL15, HSPC145
Find proteins for Q9P015 (Homo sapiens) Explore Q9P015  Go to UniProtKB:  Q9P015
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PHAROS  Q9P015 GTEx  ENSG00000137547

Entity ID: 12
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L16, mitochondrial	N	251	Homo sapiens	Mutation(s): 0  Gene Names: MRPL16, PNAS-111
Find proteins for Q9NX20 (Homo sapiens) Explore Q9NX20  Go to UniProtKB:  Q9NX20
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PHAROS  Q9NX20 GTEx  ENSG00000166902

Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L17, mitochondrial	O	175	Homo sapiens	Mutation(s): 0  Gene Names: MRPL17, LIP2
Find proteins for Q9NRX2 (Homo sapiens) Explore Q9NRX2  Go to UniProtKB:  Q9NRX2
NIH Common Fund Data Resources
PHAROS  Q9NRX2 GTEx  ENSG00000158042

Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L18, mitochondrial	P	180	Homo sapiens	Mutation(s): 0  Gene Names: MRPL18, HSPC071
Find proteins for Q9H0U6 (Homo sapiens) Explore Q9H0U6  Go to UniProtKB:  Q9H0U6
NIH Common Fund Data Resources
PHAROS  Q9H0U6

Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L19, mitochondrial	Q	292	Homo sapiens	Mutation(s): 0  Gene Names: MRPL19, KIAA0104, MRPL15
Find proteins for P49406 (Homo sapiens) Explore P49406  Go to UniProtKB:  P49406
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PHAROS  P49406 GTEx  ENSG00000115364

Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L20, mitochondrial	R	149	Homo sapiens	Mutation(s): 0  Gene Names: MRPL20
Find proteins for Q9BYC9 (Homo sapiens) Explore Q9BYC9  Go to UniProtKB:  Q9BYC9
NIH Common Fund Data Resources
PHAROS  Q9BYC9 GTEx  ENSG00000242485

Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L21, mitochondrial	S	205	Homo sapiens	Mutation(s): 0  Gene Names: MRPL21
Find proteins for Q7Z2W9 (Homo sapiens) Explore Q7Z2W9  Go to UniProtKB:  Q7Z2W9
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GTEx  ENSG00000197345

Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L22, mitochondrial	T	206	Homo sapiens	Mutation(s): 0  Gene Names: MRPL22, MRPL25, RPML25, HSPC158
Find proteins for Q9NWU5 (Homo sapiens) Explore Q9NWU5  Go to UniProtKB:  Q9NWU5
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PHAROS  Q9NWU5

Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L23, mitochondrial	U	153	Homo sapiens	Mutation(s): 0  Gene Names: MRPL23, L23MRP, RPL23L
Find proteins for Q16540 (Homo sapiens) Explore Q16540  Go to UniProtKB:  Q16540
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PHAROS  Q16540 GTEx  ENSG00000214026

Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L24, mitochondrial	V	216	Homo sapiens	Mutation(s): 0  Gene Names: MRPL24
Find proteins for Q96A35 (Homo sapiens) Explore Q96A35  Go to UniProtKB:  Q96A35
NIH Common Fund Data Resources
PHAROS  Q96A35 GTEx  ENSG00000143314

Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L27, mitochondrial	W	148	Homo sapiens	Mutation(s): 0  Gene Names: MRPL27, HSPC250
Find proteins for Q9P0M9 (Homo sapiens) Explore Q9P0M9  Go to UniProtKB:  Q9P0M9
NIH Common Fund Data Resources
PHAROS  Q9P0M9 GTEx  ENSG00000108826

Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L28, mitochondrial	X	256	Homo sapiens	Mutation(s): 0  Gene Names: MRPL28, MAAT1
Find proteins for Q13084 (Homo sapiens) Explore Q13084  Go to UniProtKB:  Q13084
NIH Common Fund Data Resources
PHAROS  Q13084 GTEx  ENSG00000086504

Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L47, mitochondrial	Y	250	Homo sapiens	Mutation(s): 0  Gene Names: MRPL47, NCM1, CGI-204
Find proteins for Q9HD33 (Homo sapiens) Explore Q9HD33  Go to UniProtKB:  Q9HD33
NIH Common Fund Data Resources
PHAROS  Q9HD33

Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L30, mitochondrial	Z	161	Homo sapiens	Mutation(s): 0  Gene Names: MRPL30, MRPL28, RPML28, HSPC249
Find proteins for Q8TCC3 (Homo sapiens) Explore Q8TCC3  Go to UniProtKB:  Q8TCC3
NIH Common Fund Data Resources
PHAROS  Q8TCC3 GTEx  ENSG00000185414

Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L32, mitochondrial	0	188	Homo sapiens	Mutation(s): 0  Gene Names: MRPL32, HSPC283
Find proteins for Q9BYC8 (Homo sapiens) Explore Q9BYC8  Go to UniProtKB:  Q9BYC8
NIH Common Fund Data Resources
PHAROS  Q9BYC8 GTEx  ENSG00000106591

Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L33, mitochondrial	1	65	Homo sapiens	Mutation(s): 0  Gene Names: MRPL33, C2orf1
Find proteins for O75394 (Homo sapiens) Explore O75394  Go to UniProtKB:  O75394
NIH Common Fund Data Resources
PHAROS  O75394 GTEx  ENSG00000243147

Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L34, mitochondrial	2	92	Homo sapiens	Mutation(s): 0  Gene Names: MRPL34
Find proteins for Q9BQ48 (Homo sapiens) Explore Q9BQ48  Go to UniProtKB:  Q9BQ48
NIH Common Fund Data Resources
PHAROS  Q9BQ48 GTEx  ENSG00000130312

Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L35, mitochondrial	3	188	Homo sapiens	Mutation(s): 0  Gene Names: MRPL35, BM-007
Find proteins for Q9NZE8 (Homo sapiens) Explore Q9NZE8  Go to UniProtKB:  Q9NZE8
NIH Common Fund Data Resources
PHAROS  Q9NZE8

Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L36, mitochondrial	4	103	Homo sapiens	Mutation(s): 0  Gene Names: MRPL36, BRIP1
Find proteins for Q9P0J6 (Homo sapiens) Explore Q9P0J6  Go to UniProtKB:  Q9P0J6
NIH Common Fund Data Resources
PHAROS  Q9P0J6 GTEx  ENSG00000171421

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L2, mitochondrial	D	305	Homo sapiens	Mutation(s): 0  Gene Names: MRPL2, CGI-22
Find proteins for Q5T653 (Homo sapiens) Explore Q5T653  Go to UniProtKB:  Q5T653
NIH Common Fund Data Resources
PHAROS  Q5T653 GTEx  ENSG00000112651

Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L37, mitochondrial	5	423	Homo sapiens	Mutation(s): 0  Gene Names: MRPL37, MRPL2, RPML2, HSPC235
Find proteins for Q9BZE1 (Homo sapiens) Explore Q9BZE1  Go to UniProtKB:  Q9BZE1
NIH Common Fund Data Resources
PHAROS  Q9BZE1 GTEx  ENSG00000116221

Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L38, mitochondrial	6	380	Homo sapiens	Mutation(s): 0  Gene Names: MRPL38, HSPC262
Find proteins for Q96DV4 (Homo sapiens) Explore Q96DV4  Go to UniProtKB:  Q96DV4
NIH Common Fund Data Resources
PHAROS  Q96DV4 GTEx  ENSG00000204316

Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L39, mitochondrial	7	338	Homo sapiens	Mutation(s): 0  Gene Names: MRPL39, C21orf92, MRPL5, RPML5, MSTP003, PRED22
Find proteins for Q9NYK5 (Homo sapiens) Explore Q9NYK5  Go to UniProtKB:  Q9NYK5
NIH Common Fund Data Resources
PHAROS  Q9NYK5 GTEx  ENSG00000154719

Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L40, mitochondrial	8	206	Homo sapiens	Mutation(s): 0  Gene Names: MRPL40, NLVCF, URIM
Find proteins for Q9NQ50 (Homo sapiens) Explore Q9NQ50  Go to UniProtKB:  Q9NQ50
NIH Common Fund Data Resources
PHAROS  Q9NQ50 GTEx  ENSG00000185608

Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L41, mitochondrial	9	137	Homo sapiens	Mutation(s): 0  Gene Names: MRPL41, BMRP, MRPL27, RPML27, PIG3
Find proteins for Q8IXM3 (Homo sapiens) Explore Q8IXM3  Go to UniProtKB:  Q8IXM3
NIH Common Fund Data Resources
PHAROS  Q8IXM3 GTEx  ENSG00000182154

Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L42, mitochondrial	a	142	Homo sapiens	Mutation(s): 0  Gene Names: MRPL42, MRPL31, MRPS32, RPML31, HSPC204, PTD007
Find proteins for Q9Y6G3 (Homo sapiens) Explore Q9Y6G3  Go to UniProtKB:  Q9Y6G3
NIH Common Fund Data Resources
PHAROS  Q9Y6G3

Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L43, mitochondrial	b	215	Homo sapiens	Mutation(s): 0  Gene Names: MRPL43
Find proteins for Q8N983 (Homo sapiens) Explore Q8N983  Go to UniProtKB:  Q8N983
NIH Common Fund Data Resources
PHAROS  Q8N983 GTEx  ENSG00000055950

Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L44, mitochondrial	c	332	Homo sapiens	Mutation(s): 0  Gene Names: MRPL44 EC: 3.1.26
Find proteins for Q9H9J2 (Homo sapiens) Explore Q9H9J2  Go to UniProtKB:  Q9H9J2
NIH Common Fund Data Resources
PHAROS  Q9H9J2 GTEx  ENSG00000135900

Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L45, mitochondrial	d	306	Homo sapiens	Mutation(s): 0  Gene Names: MRPL45
Find proteins for Q9BRJ2 (Homo sapiens) Explore Q9BRJ2  Go to UniProtKB:  Q9BRJ2
NIH Common Fund Data Resources
PHAROS  Q9BRJ2

Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L46, mitochondrial	e	279	Homo sapiens	Mutation(s): 0  Gene Names: MRPL46, C15orf4, LIECG2
Find proteins for Q9H2W6 (Homo sapiens) Explore Q9H2W6  Go to UniProtKB:  Q9H2W6

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L3, mitochondrial	E	348	Homo sapiens	Mutation(s): 0  Gene Names: MRPL3, MRL3, RPML3
Find proteins for P09001 (Homo sapiens) Explore P09001  Go to UniProtKB:  P09001
NIH Common Fund Data Resources
PHAROS  P09001 GTEx  ENSG00000114686

Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L48, mitochondrial	f	212	Homo sapiens	Mutation(s): 0  Gene Names: MRPL48, CGI-118, HSPC290
Find proteins for Q96GC5 (Homo sapiens) Explore Q96GC5  Go to UniProtKB:  Q96GC5
NIH Common Fund Data Resources
PHAROS  Q96GC5 GTEx  ENSG00000175581

Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L49, mitochondrial	g	166	Homo sapiens	Mutation(s): 0  Gene Names: MRPL49, C11orf4, NOF1, OK/SW-cl.67
Find proteins for Q13405 (Homo sapiens) Explore Q13405  Go to UniProtKB:  Q13405
NIH Common Fund Data Resources
PHAROS  Q13405 GTEx  ENSG00000149792

Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L50, mitochondrial	h	158	Homo sapiens	Mutation(s): 0  Gene Names: MRPL50
Find proteins for Q8N5N7 (Homo sapiens) Explore Q8N5N7  Go to UniProtKB:  Q8N5N7
NIH Common Fund Data Resources
PHAROS  Q8N5N7 GTEx  ENSG00000136897

Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L51, mitochondrial	i	128	Homo sapiens	Mutation(s): 0  Gene Names: MRPL51, MRP64, CDA09, HSPC241
Find proteins for Q4U2R6 (Homo sapiens) Explore Q4U2R6  Go to UniProtKB:  Q4U2R6
NIH Common Fund Data Resources
PHAROS  Q4U2R6 GTEx  ENSG00000111639

Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L52, mitochondrial	j	123	Homo sapiens	Mutation(s): 0  Gene Names: MRPL52
Find proteins for Q86TS9 (Homo sapiens) Explore Q86TS9  Go to UniProtKB:  Q86TS9
NIH Common Fund Data Resources
PHAROS  Q86TS9 GTEx  ENSG00000172590

Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L53, mitochondrial	k	112	Homo sapiens	Mutation(s): 0  Gene Names: MRPL53
Find proteins for Q96EL3 (Homo sapiens) Explore Q96EL3  Go to UniProtKB:  Q96EL3
NIH Common Fund Data Resources
PHAROS  Q96EL3 GTEx  ENSG00000204822

Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L54, mitochondrial	l	138	Homo sapiens	Mutation(s): 0  Gene Names: MRPL54
Find proteins for Q6P161 (Homo sapiens) Explore Q6P161  Go to UniProtKB:  Q6P161
NIH Common Fund Data Resources
PHAROS  Q6P161 GTEx  ENSG00000183617

Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L55, mitochondrial	m	128	Homo sapiens	Mutation(s): 0  Gene Names: MRPL55, UNQ5835/PRO19675
Find proteins for Q7Z7F7 (Homo sapiens) Explore Q7Z7F7  Go to UniProtKB:  Q7Z7F7
NIH Common Fund Data Resources
PHAROS  Q7Z7F7 GTEx  ENSG00000162910

Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details
Ribosomal protein 63, mitochondrial	o	102	Homo sapiens	Mutation(s): 0  Gene Names: MRPL57, MRP63
Find proteins for Q9BQC6 (Homo sapiens) Explore Q9BQC6  Go to UniProtKB:  Q9BQC6
NIH Common Fund Data Resources
PHAROS  Q9BQC6 GTEx  ENSG00000173141

Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details
Peptidyl-tRNA hydrolase ICT1, mitochondrial	p	206	Homo sapiens	Mutation(s): 0  Gene Names: MRPL58, DS1, ICT1 EC: 3.1.1.29
Find proteins for Q14197 (Homo sapiens) Explore Q14197  Go to UniProtKB:  Q14197
NIH Common Fund Data Resources
PHAROS  Q14197 GTEx  ENSG00000167862

Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L4, mitochondrial	F	311	Homo sapiens	Mutation(s): 0  Gene Names: MRPL4, CDABP0091, CGI-28
Find proteins for Q9BYD3 (Homo sapiens) Explore Q9BYD3  Go to UniProtKB:  Q9BYD3
NIH Common Fund Data Resources
PHAROS  Q9BYD3 GTEx  ENSG00000105364

Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details
Growth arrest and DNA damage-inducible proteins-interacting protein 1	q	222	Homo sapiens	Mutation(s): 0  Gene Names: GADD45GIP1, MRPL59, PLINP1, PRG6
Find proteins for Q8TAE8 (Homo sapiens) Explore Q8TAE8  Go to UniProtKB:  Q8TAE8
NIH Common Fund Data Resources
PHAROS  Q8TAE8 GTEx  ENSG00000179271

Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein S18a, mitochondrial	r	196	Homo sapiens	Mutation(s): 0  Gene Names: MRPS18A
Find proteins for Q9NVS2 (Homo sapiens) Explore Q9NVS2  Go to UniProtKB:  Q9NVS2
NIH Common Fund Data Resources
PHAROS  Q9NVS2

Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein S30, mitochondrial	s	439	Homo sapiens	Mutation(s): 0  Gene Names: MRPS30, PDCD9, BM-047
Find proteins for Q9NP92 (Homo sapiens) Explore Q9NP92  Go to UniProtKB:  Q9NP92
NIH Common Fund Data Resources
PHAROS  Q9NP92

Entity ID: 53
Molecule	Chains	Sequence Length	Organism	Details
Unknown protein or protein extension	t	28	Homo sapiens	Mutation(s): 0

Entity ID: 54
Molecule	Chains	Sequence Length	Organism	Details
Mitochondrial assembly of ribosomal large subunit protein 1	u	234	Homo sapiens	Mutation(s): 0  Gene Names: MALSU1, C7orf30
Find proteins for Q96EH3 (Homo sapiens) Explore Q96EH3  Go to UniProtKB:  Q96EH3
NIH Common Fund Data Resources
PHAROS  Q96EH3 GTEx  ENSG00000156928

Entity ID: 55
Molecule	Chains	Sequence Length	Organism	Details
MIEF1 upstream open reading frame protein	v	70	Homo sapiens	Mutation(s): 0  Gene Names: MIEF1
Find proteins for L0R8F8 (Homo sapiens) Explore L0R8F8  Go to UniProtKB:  L0R8F8
NIH Common Fund Data Resources
PHAROS  L0R8F8 GTEx  ENSG00000100335

Entity ID: 56
Molecule	Chains	Sequence Length	Organism	Details
Acyl carrier protein, mitochondrial	w	156	Homo sapiens	Mutation(s): 0  Gene Names: NDUFAB1
Find proteins for O14561 (Homo sapiens) Explore O14561  Go to UniProtKB:  O14561
NIH Common Fund Data Resources
PHAROS  O14561 GTEx  ENSG00000004779

Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L9, mitochondrial	H	267	Homo sapiens	Mutation(s): 0  Gene Names: MRPL9
Find proteins for Q9BYD2 (Homo sapiens) Explore Q9BYD2  Go to UniProtKB:  Q9BYD2
NIH Common Fund Data Resources
PHAROS  Q9BYD2 GTEx  ENSG00000143436

Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L10, mitochondrial	I	261	Homo sapiens	Mutation(s): 0  Gene Names: MRPL10, MRPL8, RPML8
Find proteins for Q7Z7H8 (Homo sapiens) Explore Q7Z7H8  Go to UniProtKB:  Q7Z7H8
NIH Common Fund Data Resources
PHAROS  Q7Z7H8 GTEx  ENSG00000159111

Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L11, mitochondrial	J	192	Homo sapiens	Mutation(s): 0  Gene Names: MRPL11, CGI-113
Find proteins for Q9Y3B7 (Homo sapiens) Explore Q9Y3B7  Go to UniProtKB:  Q9Y3B7
NIH Common Fund Data Resources
PHAROS  Q9Y3B7 GTEx  ENSG00000174547

Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details
39S ribosomal protein L13, mitochondrial	K	178	Homo sapiens	Mutation(s): 0  Gene Names: MRPL13
Find proteins for Q9BYD1 (Homo sapiens) Explore Q9BYD1  Go to UniProtKB:  Q9BYD1
NIH Common Fund Data Resources
PHAROS  Q9BYD1 GTEx  ENSG00000172172

Entity ID: 1
Molecule	Chains	Length	Organism
16S ribosomal RNA	A	1559	Homo sapiens

Entity ID: 2
Molecule	Chains	Length	Organism
mitochondrial tRNAVal	B	69	Homo sapiens

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PNS	v	4'-PHOSPHOPANTETHEINE C11 H23 N2 O7 P S JDMUPRLRUUMCTL-VIFPVBQESA-N
ZN	0, 4, I	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG	A, D, M, T, W, g	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.06 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2017-08-08 
• Released Date: 2017-09-13 
Deposition Author(s): Brown, A., Rathore, S., Kimanius, D., Aibara, S., Bai, X.C., Rorbach, J., Amunts, A., Ramakrishnan, V.

Revision History 

• Version 1.0: 2017-09-13
  Type: Initial release
  
• Version 1.1: 2017-09-20
  Changes: Database references
• Version 1.2: 2017-10-18
  Changes: Database references
• Version 1.3: 2019-02-20
  Changes: Advisory, Data collection, Derived calculations
• Version 1.4: 2019-12-11
  Changes: Other