5OND

RfaH from Escherichia coli in complex with ops DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.186 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The universally-conserved transcription factor RfaH is recruited to a hairpin structure of the non-template DNA strand.

Zuber, P.K.Artsimovitch, I.NandyMazumdar, M.Liu, Z.Nedialkov, Y.Schweimer, K.Rosch, P.Knauer, S.H.

(2018) Elife 7: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcription antitermination protein RfaH
A, B
162Escherichia coli (strain K12)Mutation(s): 1 
Gene Names: rfaH (hlyT, sfrB)
Find proteins for P0AFW0 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AFW0
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*GP*CP*GP*GP*TP*AP*GP*TP*C)-3')C,D9Escherichia coli
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.186 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 36.310α = 80.45
b = 43.190β = 75.48
c = 61.860γ = 75.39
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research FoundationGermanyRo617/21-1
German Research FoundationGermanyRo617/17-1

Revision History 

  • Version 1.0: 2018-06-06
    Type: Initial release