5OK3

Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp241 and Fasudil


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.588 Å
  • R-Value Free: 0.172 
  • R-Value Work: 0.140 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of the Protein-Kinase A catalytic subunit from Criteculus Griseus in complex with compounds RKp241 and Fasudil

Mueller, J.M.Metz, A.Wulsdorf, T.Kirschner, R.Berndt, J.-P.Hrdina, R.Heine, A.Geyer, A.Schreiner, P.R.Klebe, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cAMP-dependent protein kinase catalytic subunit alpha
A
353Cricetulus griseusMutation(s): 0 
Gene Names: PRKACA
EC: 2.7.11.11
Find proteins for P25321 (Cricetulus griseus)
Go to Gene View: PRKACA
Go to UniProtKB:  P25321
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
UPF0418 protein FAM164A
D
18Cricetulus griseusMutation(s): 1 
Find proteins for G3HK48 (Cricetulus griseus)
Go to UniProtKB:  G3HK48
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
M77
Query on M77

Download SDF File 
Download CCD File 
A
5-(1,4-DIAZEPAN-1-SULFONYL)ISOQUINOLINE
Fasudil, (5-ISOQUINOLINESULFONYL)HOMOPIPERAZINE
C14 H17 N3 O2 S
NGOGFTYYXHNFQH-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  3 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
A
L-PEPTIDE LINKINGC3 H8 N O6 PSER
TPO
Query on TPO
A
L-PEPTIDE LINKINGC4 H10 N O6 PTHR
BW5
Query on BW5
D
L-peptide linkingC13 H21 N O2

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.588 Å
  • R-Value Free: 0.172 
  • R-Value Work: 0.140 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 58.609α = 90.00
b = 73.281β = 90.00
c = 108.428γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
Cootmodel building
XDSdata reduction
PHASERphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Loewe-CorporationGermany--

Revision History 

  • Version 1.0: 2018-08-08
    Type: Initial release