5OC6

Crystal structure of human tRNA-dihydrouridine(20) synthase dsRBD in complex with a 22 nucleotide dsRNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Molecular basis for transfer RNA recognition by the double-stranded RNA-binding domain of human dihydrouridine synthase 2.

Bou-Nader, C.Barraud, P.Pecqueur, L.Perez, J.Velours, C.Shepard, W.Fontecave, M.Tisne, C.Hamdane, D.

(2019) Nucleic Acids Res. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
A
120Homo sapiensMutation(s): 0 
Gene Names: DUS2 (DUS2L)
EC: 1.3.1.-
Find proteins for Q9NX74 (Homo sapiens)
Go to Gene View: DUS2
Go to UniProtKB:  Q9NX74
Entity ID: 2
MoleculeChainsLengthOrganism
RNAB,C11synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.226 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 58.440α = 90.00
b = 115.560β = 90.00
c = 66.620γ = 90.00
Software Package:
Software NamePurpose
BUSTERrefinement
XSCALEdata scaling
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-12-26
    Type: Initial release
  • Version 1.1: 2019-01-16
    Type: Data collection, Database references