5O71

Crystal structure of human USP25


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.283 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.202 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

A quaternary tetramer assembly inhibits the deubiquitinating activity of USP25.

Liu, B.Sureda-Gomez, M.Zhen, Y.Amador, V.Reverter, D.

(2018) Nat Commun 9: 4973-4973


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ubiquitin carboxyl-terminal hydrolase 25
A
716Homo sapiensMutation(s): 0 
Gene Names: USP25 (USP21)
EC: 3.4.19.12
Find proteins for Q9UHP3 (Homo sapiens)
Go to Gene View: USP25
Go to UniProtKB:  Q9UHP3
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.283 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.202 
  • Space Group: I 4 2 2
Unit Cell:
Length (Å)Angle (°)
a = 140.806α = 90.00
b = 140.806β = 90.00
c = 190.156γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
Aimlessdata scaling
XDSdata reduction
PHENIXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-06-07 
  • Released Date: 2018-06-20 
  • Deposition Author(s): Reverter, D., Liu, B.

Funding OrganizationLocationGrant Number
Spanish Ministry of Economy and CompetitivenessSpainBFU2015-66417

Revision History 

  • Version 1.0: 2018-06-20
    Type: Initial release
  • Version 1.1: 2019-04-17
    Type: Data collection, Database references