5NGD

Crystal structure of the V325G mutant of the bacteriophage G20C portal protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Porphyrin-Assisted Docking of a Thermophage Portal Protein into Lipid Bilayers: Nanopore Engineering and Characterization

Cressiot, B.Greive, S.J.Si, W.Pascoa, T.C.Mojtabavi, M.Chechik, M.Jenkins, H.T.Lu, X.Aksimentiev, A.Antson, A.A.Wanunu, M.

(2017) Acs Nano 11: 11931-11945


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Portal protein
A, B, C, D
417Thermus virus P74-26Mutation(s): 1 
Find proteins for A7XXR3 (Thermus virus P74-26)
Go to UniProtKB:  A7XXR3
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.206 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 223.234α = 90.00
b = 223.234β = 90.00
c = 115.817γ = 120.00
Software Package:
Software NamePurpose
DIALSdata reduction
SHELXphasing
REFMACrefinement
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Bilateral NSF/BIO-BBSRCUnited KingdomBB/N018729/1
Wellcome TrustUnited Kingdom101528/Z/13/Z

Revision History 

  • Version 1.0: 2017-03-29
    Type: Initial release
  • Version 1.1: 2018-08-01
    Type: Data collection, Database references