5N8U

Crystal Structure of Drosophila DHX36 helicase in complex with CTCTCCT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.182 
  • R-Value Observed: 0.186 

wwPDB Validation 3D Report Full Report



Literature

Structural and mechanistic insights into DHX36-mediated innate immunity and G-quadruplex unfolding

Chen, W.-F.Rety, S.Guo, H.-L.Wu, W.-Q.Liu, N.-N.Liu, Q.-W.Dai, Y.-X.Xi, X.-G.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CG9323, isoform AA, B944Drosophila melanogasterMutation(s): 0 
Gene Names: CG9323Dmel_CG9323Rhau38E.15cg9323DmDHX36Dmel\CG9323DmRHAURHAU
EC: 3.6.1.3 (PDB Primary Data), 3.6.4.12 (UniProt), 3.6.4.13 (UniProt)
Find proteins for Q8SWT2 (Drosophila melanogaster)
Explore Q8SWT2 
Go to UniProtKB:  Q8SWT2
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 2
    MoleculeChainsLengthOrganismImage
    DNA (5'-D(P*CP*TP*CP*TP*CP*CP*CP*T)-3')C, D8Homo sapiens
    Small Molecules
    Ligands 1 Unique
    IDChainsName / Formula / InChI Key2D Diagram3D Interactions
    PO4
    Query on PO4

    Download CCD File 
    A, B
    PHOSPHATE ION
    O4 P
    NBIIXXVUZAFLBC-UHFFFAOYSA-K
     Ligand Interaction
    Experimental Data & Validation

    Experimental Data

    • Method: X-RAY DIFFRACTION
    • Resolution: 2.62 Å
    • R-Value Free: 0.249 
    • R-Value Work: 0.182 
    • R-Value Observed: 0.186 
    • Space Group: C 1 2 1
    Unit Cell:
    Length ( Å )Angle ( ˚ )
    a = 302.368α = 90
    b = 51.288β = 114.7
    c = 164.097γ = 90
    Software Package:
    Software NamePurpose
    PHENIXrefinement
    XDSdata reduction
    Aimlessdata scaling
    PHASERphasing

    Structure Validation

    View Full Validation Report



    Entry History 

    Deposition Data

    Revision History 

    • Version 1.0: 2018-03-14
      Type: Initial release