A crystallographic fragment study with cAMP-dependent protein kinase A
Siefker, C., Heine, A., Klebe, G.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
cAMP-dependent protein kinase catalytic subunit alpha | A | 353 | Cricetulus griseus | Mutation(s): 0  Gene Names: PRKACA EC: 2.7.11.11 |
Find proteins for P25321 (Cricetulus griseus) Go to Gene View: PRKACA Go to UniProtKB:  P25321 |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
E5E Query on E5E | A | Noradrenaline C8 H12 N O3 SFLSHLFXELFNJZ-QMMMGPOBSA-O | ![]() |  Ligand Interaction | |
DMS Query on DMS | A | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
MPD Query on MPD | A | (4S)-2-METHYL-2,4-PENTANEDIOL C6 H14 O2 SVTBMSDMJJWYQN-YFKPBYRVSA-N | ![]() |  Ligand Interaction |
Modified Residues  2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P | ![]() | SER |
TPO Query on TPO | A | L-PEPTIDE LINKING | C4 H10 N O6 P | ![]() | THR |
Length (Å) | Angle (°) |
---|---|
a = 52.070 | α = 90.00 |
b = 71.190 | β = 90.00 |
c = 97.172 | γ = 90.00 |
Software Name | Purpose |
---|---|
XDS | data scaling |
Coot | model building |
XDS | data reduction |
PHASER | phasing |
PHENIX | refinement |