5MS3

Kallikrein-related peptidase 8 calcium complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.223 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Specificity profiles and antagonistic Ca2+ and Zn2+ regulation of human KLK8/neuropsin activity by modules identified in crystal structures

Debela, M.Magdolen, V.Skala, W.Craik, C.S.Schneider, E.L.Biniossek, M.L.Schilling, O.Elsaesser, B.Bode, W.Brandstetter, H.Goettig, P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Kallikrein-8
A
228Homo sapiensMutation(s): 0 
Gene Names: KLK8NRPNPRSS19TADG14UNQ283/PRO322
EC: 3.4.21.118
Find proteins for O60259 (Homo sapiens)
Go to UniProtKB:  O60259
NIH Common Fund Data Resources
PHAROS  O60259
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.223 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 45.997α = 90
b = 51.741β = 90
c = 82.863γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
Aimlessdata scaling
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Austrian Science FundAustriaP25003-B21

Revision History 

  • Version 1.0: 2018-01-17
    Type: Initial release
  • Version 1.1: 2019-07-17
    Changes: Data collection