5MPM

SERCA2a from pig heart

  • Classification: HYDROLASE
  • Organism(s): Sus scrofa

  • Deposited: 2016-12-16 Released: 2018-01-17 
  • Deposition Author(s): Drachmann, N.D., Sitsel, A., Andersen, J.L., Nissen, P., Olesen, C.
  • Funding Organization(s): VLAIO; The Danish National Research Foundation - Center for Membrane Pumps in Cells and Disease (PUMPkin); European Research Council Advanced Research grant BIOMEMOS; Karen Elise Jensens Fond; IWT doctoral grant 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.204 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of Sarcoplasmic reticulum Ca2+-ATPase

Drachmann, N.Sitsel, A.Andersen, J.L.Nissen, P.Olesen, C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
A
997Sus scrofaMutation(s): 0 
Gene Names: ATP2A2
EC: 7.2.2.10
Find proteins for P11607 (Sus scrofa)
Go to Gene View: ATP2A2
Go to UniProtKB:  P11607
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
MGF
Query on MGF

Download SDF File 
Download CCD File 
A
TRIFLUOROMAGNESATE
F3 Mg
GJOMWUHGUQLOAC-UHFFFAOYSA-K
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
CZA
Query on CZA

Download SDF File 
Download CCD File 
A
(6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE
C20 H20 N2 O3
RLOAZVAJNNPPDI-DQYPLSBCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.258 
  • R-Value Work: 0.204 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 53.349α = 90.00
b = 253.287β = 100.86
c = 64.981γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
XSCALEdata scaling
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
VLAIOBelgium--
The Danish National Research Foundation - Center for Membrane Pumps in Cells and Disease (PUMPkin)Denmark--
European Research Council Advanced Research grant BIOMEMOS--
Karen Elise Jensens Fond--
IWT doctoral grant--

Revision History 

  • Version 1.0: 2018-01-17
    Type: Initial release
  • Version 1.1: 2018-01-24
    Type: Structure summary