5MNM

Cationic trypsin in complex with benzylamine (at 295 K)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.98 Å
  • R-Value Free: 0.112 
  • R-Value Work: 0.101 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Cationic trypsin in complex with benzylamine (at 295 K)

Schiebel, J.Heine, A.Klebe, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cationic trypsin
A
223Bos taurusMutation(s): 0 
EC: 3.4.21.4
Find proteins for P00760 (Bos taurus)
Go to UniProtKB:  P00760
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
CA
Query on CA

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Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
ABN
Query on ABN

Download SDF File 
Download CCD File 
A
BENZYLAMINE
C7 H9 N
WGQKYBSKWIADBV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.98 Å
  • R-Value Free: 0.112 
  • R-Value Work: 0.101 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 54.841α = 90.00
b = 58.334β = 90.00
c = 67.781γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
PHASERphasing
Cootmodel building
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research Council268145-DrugProfilBind

Revision History 

  • Version 1.0: 2018-01-17
    Type: Initial release