5M9Y | pdb_00005m9y

NMR solution structure of Harzianin HK-VI in DPC micelles

• PDB DOI: https://doi.org/10.2210/pdb5M9Y/pdb
• BMRB: 34060

• Classification: ANTIBIOTIC
• Organism(s): Trichoderma pseudokoningii
• Mutation(s): No 


• Deposited: 2016-11-02 Released: 2018-02-28 
• Deposition Author(s): Kara, S., Zamora-Carreras, H., Afonin, S., Grage, S.L., Ulrich, A.S., Jimenez, M.A.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

11-mer peptaibol Harzianin VI: conformational and biological analysis

Kara, S., Afonin, S., Zamora-Carreras, H., Bordessa, A., Doan, V., Takeshita, N., Grage, S.L., Chaume, G., Jimenez, M.A., Fischer, R., Bruix, M., Brigaud, T., Ulrich, A.S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 1.16 kDa 
• Atom Count: 83 
• Modeled Residue Count: 12 
• Deposited Residue Count: 12 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Harzianin HK-VI	A	12	Trichoderma pseudokoningii	Mutation(s): 0

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
AIB	A	L-PEPTIDE LINKING	C4 H9 N O2		ALA
DCL	A	PEPTIDE-LIKE	C6 H15 N O		--

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2018-02-28 
Deposition Author(s): Kara, S., Zamora-Carreras, H., Afonin, S., Grage, S.L., Ulrich, A.S., Jimenez, M.A.

Revision History  

• Version 1.0: 2018-02-28
  Type: Initial release
  
• Version 1.1: 2019-05-08
  Changes: Data collection
• Version 2.0: 2023-11-15
  Changes: Atomic model, Data collection, Database references