5M85

Three-dimensional structure of the intermediate state of GAF3 from Slr1393 of Synechocystis sp. PCC6803


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.170 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Three-dimensional structure of the parental and photoproduct state of GAF3 from Slr1393 of Synechocystis sp. PCC6803

Xu, X.-L.Zhao, K.-H.Hoeppner, A.Gaertner, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Sensory transduction histidine kinase
A
215Synechocystis sp. (strain PCC 6803 / Kazusa)Mutation(s): 0 
Find proteins for P73184 (Synechocystis sp. (strain PCC 6803 / Kazusa))
Go to UniProtKB:  P73184
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
CYC
Query on CYC

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Download CCD File 
A
PHYCOCYANOBILIN
C33 H40 N4 O6
VXTXPYZGDQPMHK-GMXXPEQVSA-N
 Ligand Interaction
TRS
Query on TRS

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Download CCD File 
A
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
C4 H12 N O3
LENZDBCJOHFCAS-UHFFFAOYSA-O
 Ligand Interaction
3CX
Query on 3CX

Download SDF File 
Download CCD File 
A
(2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid
C9 H19 N O4 S
INEWUCPYEUEQTN-VIFPVBQESA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.222 
  • R-Value Work: 0.170 
  • Space Group: P 65
Unit Cell:
Length (Å)Angle (°)
a = 75.101α = 90.00
b = 75.101β = 90.00
c = 71.210γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
XDSdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-12-20
    Type: Initial release