5M68

AT-rich DNA dodecamer with extra helical guanine-nickel coordination


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.64 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

AT-rich DNA with extra helical guanine-nickel coordination

Campos, J.L.Saperas, N.Acosta-Reyes, F.J.Pagan, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(*CP*GP*AP*AP*TP*TP*AP*AP*TP*TP*CP*G)-3')A,B,C,D,E,F12unidentified
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NI
Query on NI

Download SDF File 
Download CCD File 
A, B, C, D, E, F
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.64 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.227 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 44.780α = 90.00
b = 44.780β = 90.00
c = 99.010γ = 120.00
Software Package:
Software NamePurpose
iMOSFLMdata reduction
SCALAdata scaling
REFMACrefinement
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationCountryGrant Number
MINECO - FEDERSpainBFU-2009-10380
Generalitat de CatalunyaSpainSGR-2009-1208

Revision History 

  • Version 1.0: 2017-11-15
    Type: Initial release