5LXU

Structure of the DNA-binding domain of LUX ARRHYTHMO


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.195 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of the DNA-binding domain of LUX ARRHYTHMO

Zubieta, C.Silva, C.S.Lai, X.Wigge, P.Nanao, M.H.Nayak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcription factor LUX
A
57Arabidopsis thalianaGene Names: LUX (PCL1)
Find proteins for Q9SNB4 (Arabidopsis thaliana)
Go to UniProtKB:  Q9SNB4
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*AP*TP*GP*CP*GP*TP*AP*TP*CP*TP*TP*AP*GP*AP*TP*AP*CP*GP*CP*A)-3')U10Arabidopsis thaliana
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(*AP*TP*GP*CP*GP*TP*AP*TP*CP*TP*TP*AP*GP*AP*TP*AP*CP*GP*CP*A)-3')B10Arabidopsis thaliana
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.195 
  • Space Group: P 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 42.160α = 90.00
b = 32.830β = 98.61
c = 53.760γ = 90.00
Software Package:
Software NamePurpose
SHELXphasing
BUSTER-TNTrefinement
XDSdata reduction
PDB_EXTRACTdata extraction
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationCountryGrant Number
ATIP-AvenirFrance--

Revision History 

  • Version 1.0: 2017-10-25
    Type: Initial release