5L23

Crystal structure of the complex between the N-terminal SH3 domain of CrkII and a proline-rich ligand


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.77 Å
  • R-Value Free: 0.210 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of the complex between the N-terminal SH3 domain of CrkII and a proline-rich ligand

Bhatt, V.S.Krieger, I.Sacchettini, J.Cho, J.-H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Adapter molecule crk
A
58Mus musculusMutation(s): 0 
Gene Names: Crk (Crko)
Find proteins for Q64010 (Mus musculus)
Go to UniProtKB:  Q64010
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
C3G derived peptide
B
17Homo sapiensMutation(s): 0 
Gene Names: RAPGEF1 (GRF2)
Find proteins for Q13905 (Homo sapiens)
Go to Gene View: RAPGEF1
Go to UniProtKB:  Q13905
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PEG
Query on PEG

Download SDF File 
Download CCD File 
A
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
NH2
Query on NH2
B
NON-POLYMERH2 N

--

ACE
Query on ACE
B
NON-POLYMERC2 H4 O

--

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.77 Å
  • R-Value Free: 0.210 
  • R-Value Work: 0.174 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 27.600α = 90.00
b = 41.340β = 90.00
c = 56.820γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
MOSFLMdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-09-07
    Type: Initial release
  • Version 1.1: 2017-11-15
    Type: Derived calculations, Source and taxonomy