5KZT

Listeria monocytogenes OppA bound to peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.205 
  • R-Value Work: 0.167 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Peptide/nickel transport system substrate-binding protein
A, B
536Listeria monocytogenes serotype 1/2a (strain 10403S)Mutation(s): 0 
Find proteins for A0A0H3GJB6 (Listeria monocytogenes serotype 1/2a (strain 10403S))
Go to UniProtKB:  A0A0H3GJB6
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Hexamer peptide: SER-ASP-GLU-SER-LYS-GLY
C
6N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Hexamer peptide: SER-ASP-GLU-SER-SER-GLY
D
6N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 100.277α = 90.00
b = 74.630β = 109.38
c = 155.061γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data scaling
REFMACrefinement
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-08-10
    Type: Initial release
  • Version 1.1: 2017-09-27
    Type: Data collection, Derived calculations