Structural and kinetic characterization of isocitrate dehydrogenase-2 from Mycobacterium tuberculosis
Sacchettini, J.C., Cheng, Y.S.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Isocitrate dehydrogenase | 745 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0  Gene Names: icd2, Rv0066c, LH57_00380 EC: 1.1.1.42 | ||
UniProt | |||||
Find proteins for O53611 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore O53611  Go to UniProtKB:  O53611 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O53611 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAP Query on NAP | E [auth A], H [auth B], L [auth C], Q [auth D] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N | |||
MLT Query on MLT | F [auth A] | D-MALATE C4 H6 O5 BJEPYKJPYRNKOW-UWTATZPHSA-N | |||
SIN Query on SIN | M [auth C] | SUCCINIC ACID C4 H6 O4 KDYFGRWQOYBRFD-UHFFFAOYSA-N | |||
MLA Query on MLA | I [auth B], R [auth D] | MALONIC ACID C3 H4 O4 OFOBLEOULBTSOW-UHFFFAOYSA-N | |||
GOL Query on GOL | N [auth C], S [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | G [auth A] J [auth B] K [auth B] O [auth C] P [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 74.827 | α = 86.01 |
b = 110.861 | β = 78.62 |
c = 114.914 | γ = 76.79 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-3000 | data collection |
HKL-2000 | data scaling |
PDB_EXTRACT | data extraction |
HKL-3000 | data reduction |
MOLREP | phasing |