5K5Y

Crystal structure of truncated FlgD (monoclinic form) from the human pathogen Helicobacter pylori (strain 26695)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure and Stability of FlgD from the Pathogenic 26695 Strain of Helicobacter pylori

Kekez, I.Cendron, L.Stojanovic, M.Zanotti, G.Matkovic-Calogovic, D.

(2016) Croatica Chemica Acta --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Basal-body rod modification protein FlgD
A, B, C, D
146Helicobacter pylori (strain ATCC 700392 / 26695)Mutation(s): 0 
Find proteins for O25565 (Helicobacter pylori (strain ATCC 700392 / 26695))
Go to UniProtKB:  O25565
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.227 
  • Space Group: P 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 77.510α = 90.00
b = 34.000β = 98.90
c = 133.340γ = 90.00
Software Package:
Software NamePurpose
iMOSFLMdata reduction
SCALAdata scaling
REFMACrefinement
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
University of PaduaItalyPRIN 2010-2011 (MIUR)

Revision History 

  • Version 1.0: 2016-12-21
    Type: Initial release