5K1Y

P2(1) Structure of pNOB8 AspA-DNA complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.97 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.210 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Detailed structural analysis of AspA-DNA contacts

Schumacher, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
AspA
C, D, A, B, E, F
92Sulfolobus sp. NOB8H2Mutation(s): 0 
Find proteins for O93706 (Sulfolobus sp. NOB8H2)
Go to UniProtKB:  O93706
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (33-MER)P33synthetic construct
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (33-MER)N33synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.97 Å
  • R-Value Free: 0.280 
  • R-Value Work: 0.210 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 84.366α = 90.00
b = 72.306β = 114.72
c = 90.508γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
SCALAdata scaling
MOSFLMdata reduction
PDB_EXTRACTdata extraction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2016-05-18 
  • Released Date: 2016-06-15 
  • Deposition Author(s): Schumacher, M.
  • This entry supersedes: 4RU7 5FC0

Revision History 

  • Version 1.0: 2016-06-15
    Type: Initial release
  • Version 1.1: 2016-08-17
    Type: Other
  • Version 1.2: 2019-02-06
    Type: Data collection, Derived calculations, Source and taxonomy