5JXS

Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.264 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Both cis and trans Activities of Foot-and-Mouth Disease Virus 3D Polymerase Are Essential for Viral RNA Replication.

Herod, M.R.Ferrer-Orta, C.Loundras, E.A.Ward, J.C.Verdaguer, N.Rowlands, D.J.Stonehouse, N.J.

(2016) J.Virol. 90: 6864-6883


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RNA dependent RNA polymerase
A
481Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C)Mutation(s): 2 
Find proteins for P03311 (Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C))
Go to UniProtKB:  P03311
Entity ID: 2
MoleculeChainsLengthOrganism
RNA TemplateB8Foot-and-mouth disease virus
Entity ID: 3
MoleculeChainsLengthOrganism
RNA PrimerC6Foot-and-mouth disease virus
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.264 
  • R-Value Work: 0.205 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 95.778α = 90.00
b = 95.778β = 90.00
c = 100.875γ = 120.00
Software Package:
Software NamePurpose
SCALAdata scaling
XDSdata reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-06-01
    Type: Initial release
  • Version 1.1: 2016-07-20
    Type: Database references