5JR0 | pdb_00005jr0

Domain 4 Segment 6 of voltage-gated sodium channel Nav1.4

• PDB DOI: https://doi.org/10.2210/pdb5JR0/pdb
• BMRB: 30076

• Classification: METAL BINDING PROTEIN
• Organism(s): Rattus norvegicus
• Mutation(s): Yes 
• Membrane Protein: Yes  OPMPDBTMMemProtMD


• Deposited: 2016-05-05 Released: 2017-05-17 
• Deposition Author(s): Niitsu, A., Egawa, A., Ikeda, K., Tachibana, K., Fujiwara, T.
• Funding Organization(s): Japan Society for the Promotion of Science

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Experimental Data Snapshot

• Method: SOLID-STATE NMR
• Conformers Calculated: 1000 
• Conformers Submitted: 10 
• Selection Criteria: structures with the least restraint violations 

Literature

Veratridine binding to a transmembrane segment of mammalian sodium channel Nav1.4 determined by solid-state NMR

Niitsu, A., Egawa, A., Ikeda, K., Tachibana, K., Fujiwara, T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 4.03 kDa 
• Atom Count: 283 
• Modeled Residue Count: 35 
• Deposited Residue Count: 35 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Sodium channel protein type 4 subunit alpha	A	35	Rattus norvegicus	Mutation(s): 1  Membrane Entity: Yes
UniProt
Find proteins for P15390 (Rattus norvegicus) Explore P15390  Go to UniProtKB:  P15390

Experimental Data & Validation

Experimental Data

• Method: SOLID-STATE NMR
• Conformers Calculated: 1000 
• Conformers Submitted: 10 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2017-05-17 
Deposition Author(s): Niitsu, A., Egawa, A., Ikeda, K., Tachibana, K., Fujiwara, T.

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Funding Organization	Location	Grant Number
Japan Society for the Promotion of Science	Japan	--

Revision History  

• Version 1.0: 2017-05-17
  Type: Initial release
  
• Version 1.1: 2024-10-23
  Changes: Data collection, Database references, Structure summary