5JKK

Crystal structure of the negatively supercharged variant Ftn(neg) of human heavy chain ferritin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.143 
  • R-Value Work: 0.124 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Self-assembly of charged protein containers enables positioning of nanoparticles in a 3-D lattice to form biohybrid materials

Kuenzle, M.Eckert, T.Beck, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ferritin heavy chain
A, B, C, D, E, F, G, H
183Homo sapiensMutation(s): 5 
Gene Names: FTH1 (FTH, FTHL6)
EC: 1.16.3.1
Find proteins for P02794 (Homo sapiens)
Go to Gene View: FTH1
Go to UniProtKB:  P02794
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A, D
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
FE
Query on FE

Download SDF File 
Download CCD File 
A, B, C, D, E, F, G, H
FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.143 
  • R-Value Work: 0.124 
  • Space Group: P 2 3
Unit Cell:
Length (Å)Angle (°)
a = 180.980α = 90.00
b = 180.980β = 90.00
c = 180.980γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
XSCALEdata scaling
REFMACrefinement
XDSdata reduction
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2016-04-26 
  • Released Date: 2017-05-10 
  • Deposition Author(s): Kuenzle, M., Beck, T.

Revision History 

  • Version 1.0: 2017-05-10
    Type: Initial release