5JJZ

Chromo domain of human Chromodomain Protein, Y-Like 2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.230 
  • R-Value Observed: 0.232 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The crystal structure of CDYL2 domain of human CDYL2 protein

WU, H.DONG, A.ZENG, H.ELBAKKOURI, M.BARSYTE, D.VEDADI, M.TATLOCK, J.OWEN, D.BUNNAGE, M.Bountra, C.Arrowsmith, C.H.Edwards, A.M.BROWN, P.J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Chromodomain Y-like protein 2A83Homo sapiensMutation(s): 0 
Gene Names: CDYL2
UniProt & NIH Common Fund Data Resources
Find proteins for Q8N8U2 (Homo sapiens)
Explore Q8N8U2 
Go to UniProtKB:  Q8N8U2
PHAROS:  Q8N8U2
Protein Feature View
Expand
  • Reference Sequence
  • Find similar proteins by:  Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
LYS-LYS-LYS-ALA-ARG-MLY-SER-ALA-GLY-ALA-ALA-LYS-TYRB13Homo sapiensMutation(s): 0 
Gene Names: H1-4H1F4HIST1H1E
UniProt & NIH Common Fund Data Resources
Find proteins for P10412 (Homo sapiens)
Explore P10412 
Go to UniProtKB:  P10412
PHAROS:  P10412
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MLY
Query on MLY
BL-PEPTIDE LINKINGC8 H18 N2 O2LYS
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 57.962α = 90
b = 57.962β = 90
c = 98.824γ = 120
Software Package:
Software NamePurpose
SCALEPACKdata scaling
MOLREPphasing
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-3000data reduction

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-05-25
    Type: Initial release