5JFK

Crystal structure of a TDR receptor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.647 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.222 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of a TDR receptor

Li, Z.Xu, G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Leucine-rich repeat receptor-like protein kinase TDR
A, B
613Arabidopsis thalianaMutation(s): 0 
Gene Names: TDR (PXY)
EC: 2.7.11.1
Find proteins for Q9FII5 (Arabidopsis thaliana)
Go to UniProtKB:  Q9FII5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG

Download SDF File 
Download CCD File 
A, B
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.647 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.222 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 92.336α = 90.00
b = 92.336β = 90.00
c = 250.127γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2016-04-19 
  • Released Date: 2017-03-29 
  • Deposition Author(s): Li, Z., Xu, G.

Revision History 

  • Version 1.0: 2017-03-29
    Type: Initial release