5J4R

WELO5 SMALL MOLECULE HALOGENASE WITH NI(II) AND 2-OXOGLUTARATE

• PDB DOI: https://doi.org/10.2210/pdb5J4R/pdb

• Classification: HYDROLASE
• Organism(s): Hapalosiphon welwitschii UTEX B 1830
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2016-04-01 Released: 2017-04-12 
• Deposition Author(s): McDonough, M.A., Gallimore, E., Clifton, I.J., Schofield, C.J.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free: 0.160 
• R-Value Work: 0.138 
• R-Value Observed: 0.139 

Literature

WELO5 SMALL MOLECULE HALOGENASE WITH NI(II) AND 2-OXOGLUTARATE

Gallimore, E., McDonough, M.A., Clifton, I.J., Schofield, C.J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 32.76 kDa 
• Atom Count: 2,492 
• Modelled Residue Count: 280 
• Deposited Residue Count: 291 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
WelO5	A	291	Hapalosiphon welwitschii UTEX B 1830	Mutation(s): 0
UniProt
Find proteins for A0A067YX61 (Hapalosiphon welwitschii UTEX B 1830) Explore A0A067YX61  Go to UniProtKB:  A0A067YX61

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
AKG	B [auth A]	2-OXOGLUTARIC ACID C5 H6 O5 KPGXRSRHYNQIFN-UHFFFAOYSA-N
NI	C [auth A]	NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free: 0.160 
• R-Value Work: 0.138 
• R-Value Observed: 0.139 
• Space Group: I 2 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.03	α = 90
b = 102.77	β = 90
c = 123.98	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XSCALE	data scaling
SHELX	phasing
PDB_EXTRACT	data extraction
XDS	data reduction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2017-04-12 
Deposition Author(s): McDonough, M.A., Gallimore, E., Clifton, I.J., Schofield, C.J.

Revision History  

• Version 1.0: 2017-04-12
  Type: Initial release