5IZB | pdb_00005izb

Murin CXCL13 solution structure featuring a folded N-terminal domain

PDB DOI: https://doi.org/10.2210/pdb5IZB/pdb
BMRB: 30042

Classification: SIGNALING PROTEIN
Organism(s): Mus musculus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2016-03-25 Released: 2017-04-05
Deposition Author(s): Monneau, Y.R., Lortat-Jacob, H.
Funding Organization(s): French National Research Agency

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 5IZB

This is version 1.3 of the entry. See complete history.

Literature

Murin CXCL13 solution structure featuring a folded N-terminal domain

Monneau, Y.R., Luo, L., Vives, R., Arenzana-Seidedos, F., Lortat-Jacob, H.

To be published.

Macromolecule Content

Total Structure Weight: 9.94 kDa
Atom Count: 693
Modeled Residue Count: 89
Deposited Residue Count: 89
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
C-X-C motif chemokine 13	A	89	Mus musculus	Mutation(s): 0 Gene Names: Cxcl13, Blc, Scyb13
UniProt & NIH Common Fund Data Resources
Find proteins for O55038 (Mus musculus) Explore O55038 Go to UniProtKB: O55038
IMPC: MGI:1888499
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O55038
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2017-04-05

Deposition Author(s):

Lortat-Jacob, H.

Funding Organization	Location	Grant Number
French National Research Agency	France	--

Revision History (Full details and data files)

Version 1.0: 2017-04-05
Type: Initial release
Version 1.1: 2017-09-06
Changes: Author supporting evidence, Derived calculations
Version 1.2: 2019-05-08
Changes: Data collection
Version 1.3: 2024-11-20
Changes: Data collection, Database references, Structure summary

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.