5IZ4

Crystal structure of a putative short-chain dehydrogenase/reductase from Burkholderia xenovorans


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.182 
  • R-Value Work: 0.152 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of a putative short-chain dehydrogenase/reductase from Burkholderia xenovorans

Abendroth, J.Mayclin, S.J.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative short-chain dehydrogenase/reductase
A
271Paraburkholderia xenovorans (strain LB400)Mutation(s): 0 
EC: 1.1.1.100
Find proteins for Q13GL4 (Paraburkholderia xenovorans (strain LB400))
Go to UniProtKB:  Q13GL4
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ADP
Query on ADP

Download SDF File 
Download CCD File 
A
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
MRD
Query on MRD

Download SDF File 
Download CCD File 
A
(4R)-2-METHYLPENTANE-2,4-DIOL
C6 H14 O2
SVTBMSDMJJWYQN-RXMQYKEDSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 84.610α = 90.00
b = 84.610β = 90.00
c = 135.250γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
Cootmodel building
XDSdata scaling
MOLREPphasing
XSCALEdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2016-05-04
    Type: Initial release
  • Version 1.1: 2017-11-22
    Type: Derived calculations, Refinement description